Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl/propionyl-coa carboxylase subunit alpha | DI528_12315 | Not Available | Negative | 2658654 - 2660657 | 72210.8 |
| hypothetical protein | DI528_12320 | Not Available | Negative | 2660666 - 2661043 | 14114.9 |
| methylmalonyl-coa carboxyltransferase | DI528_12325 | Not Available | Negative | 2661055 - 2662587 | 56066.0 |
| cro/cl family transcriptional regulator | DI528_12330 | Not Available | Positive | 2662722 - 2664131 | 52115.0 |
| lysr family transcriptional regulator | DI528_12335 | Not Available | Negative | 2664162 - 2665058 | 33001.0 |
| rida family protein | DI528_12340 | Not Available | Positive | 2665178 - 2665585 | 14052.1 |
| 3-hydroxyisobutyryl-coa hydrolase | DI528_12345 | Not Available | Negative | 2665588 - 2666640 | 37412.0 |
| acyl-coa dehydrogenase | DI528_12350 | Not Available | Negative | 2666691 - 2667830 | 40454.4 |
| betaine-aldehyde dehydrogenase | DI528_12355 | Not Available | Negative | 2668245 - 2669759 | 53508.1 |
| (2fe-2s)-binding protein | DI528_12360 | Not Available | Negative | 2669761 - 2670246 | 16959.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
