Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DI528_12155 | Not Available | Negative | 2624893 - 2625903 | 35532.6 |
| fad-dependent oxidoreductase | DI528_12165 | Not Available | Positive | 2626349 - 2627596 | 45185.7 |
| amidase | DI528_12170 | Not Available | Negative | 2627926 - 2629320 | 50356.0 |
| peptide abc transporter atp-binding protein | DI528_12175 | Not Available | Negative | 2629368 - 2630348 | 35646.8 |
| peptide abc transporter atp-binding protein | DI528_12180 | Not Available | Negative | 2630345 - 2631328 | 35349.9 |
| peptide abc transporter permease | DI528_12185 | Not Available | Negative | 2631325 - 2632185 | 29950.6 |
| peptide abc transporter | DI528_12190 | Not Available | Negative | 2632182 - 2633132 | 33578.2 |
| abc transporter substrate-binding protein | DI528_12195 | Not Available | Negative | 2633430 - 2634965 | 55990.4 |
| lysr family transcriptional regulator | DI528_12200 | Not Available | Negative | 2635094 - 2636014 | 32998.2 |
| duf982 domain-containing protein | DI528_12205 | Not Available | Negative | 2636130 - 2636477 | 12724.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
