Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein | DI528_12105 | Not Available | Negative | 2613162 - 2614412 | 44888.3 |
| histidinol dehydrogenase | DI528_12110 | Not Available | Negative | 2614483 - 2615802 | 47268.7 |
| acetolactate synthase | DI528_12115 | Not Available | Negative | 2615899 - 2617701 | 64287.7 |
| hypothetical protein | DI528_12120 | Not Available | Positive | 2618109 - 2618798 | 26209.9 |
| transcriptional regulator | DI528_12125 | Not Available | Negative | 2618895 - 2619719 | 31559.7 |
| gfo/idh/moca family oxidoreductase | DI528_12130 | Not Available | Positive | 2619888 - 2620886 | 36556.7 |
| sugar phosphate isomerase/epimerase | DI528_12135 | Not Available | Positive | 2620883 - 2621770 | 32487.7 |
| had family hydrolase | DI528_12140 | Not Available | Positive | 2622220 - 2622855 | 23246.6 |
| deor/glpr transcriptional regulator | DI528_12145 | Not Available | Positive | 2622848 - 2623630 | 28014.4 |
| beta-hexosaminidase | DI528_12150 | Not Available | Positive | 2623660 - 2624664 | 35426.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
