Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf455 domain-containing protein | DI528_11805 | Not Available | Negative | 2545880 - 2546704 | 30555.6 |
| peroxiredoxin | DI528_11810 | Not Available | Negative | 2546722 - 2547189 | 16591.8 |
| hypothetical protein | DI528_11815 | Not Available | Positive | 2547315 - 2550761 | 122248.0 |
| aldehyde-activating protein | DI528_11820 | Not Available | Negative | 2550772 - 2551164 | 15047.6 |
| tyrosine--trna ligase | DI528_11825 | Not Available | Negative | 2551290 - 2552096 | 29238.1 |
| aminopeptidase p family protein | DI528_11830 | Not Available | Negative | 2552185 - 2553987 | 65186.9 |
| hypothetical protein | DI528_11835 | Not Available | Positive | 2554023 - 2554229 | 7241.94 |
| abc transporter permease | DI528_11840 | Not Available | Negative | 2554196 - 2555152 | 34884.7 |
| abc transporter permease | DI528_11845 | Not Available | Negative | 2555149 - 2556048 | 31842.9 |
| abc transporter atp-binding protein | DI528_11850 | Not Available | Negative | 2556111 - 2557958 | 67424.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
