Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | DI528_11755 | Not Available | Positive | 2536432 - 2537361 | 34339.2 |
| vwa domain-containing protein | DI528_11760 | Not Available | Positive | 2537365 - 2538621 | 46870.5 |
| xdhc/coxi family protein | DI528_11765 | Not Available | Positive | 2538624 - 2538953 | 11498.8 |
| xdhc/coxf family protein | DI528_11770 | Not Available | Positive | 2538953 - 2539660 | 25193.4 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | DI528_11775 | Not Available | Positive | 2539657 - 2541291 | 56900.0 |
| competence protein tfox | DI528_11780 | Not Available | Positive | 2541297 - 2541710 | 15154.0 |
| dna mismatch repair protein mutt | DI528_11785 | Not Available | Negative | 2541672 - 2542079 | 15105.0 |
| rna helicase | DI528_11790 | Not Available | Negative | 2542109 - 2543596 | 55264.1 |
| lyse family translocator | DI528_11795 | Not Available | Negative | 2543743 - 2544366 | 21820.3 |
| peptidase | DI528_11800 | Not Available | Negative | 2544418 - 2545749 | 47582.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
