Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DI528_11400 | Not Available | Positive | 2464681 - 2465772 | 40336.8 |
| beta-mannosidase | DI528_11405 | Not Available | Positive | 2465835 - 2468297 | 91821.7 |
| xylose isomerase | DI528_11410 | Not Available | Positive | 2468365 - 2469126 | 27809.8 |
| oxidoreductase | DI528_11415 | Not Available | Positive | 2469149 - 2470282 | 40431.3 |
| l-glyceraldehyde 3-phosphate reductase | DI528_11420 | Not Available | Positive | 2470426 - 2471478 | 38960.3 |
| glycoside hydrolase 43 family protein | DI528_11425 | Not Available | Positive | 2471574 - 2473184 | 60648.1 |
| s-formylglutathione hydrolase | DI528_11430 | Not Available | Negative | 2473239 - 2474072 | 31317.1 |
| duf1345 domain-containing protein | DI528_11435 | Not Available | Negative | 2474097 - 2474759 | 23682.3 |
| yaii/yqxd family protein | DI528_11440 | Not Available | Negative | 2474799 - 2475239 | 15663.8 |
| gnat family n-acetyltransferase | DI528_11445 | Not Available | Negative | 2475236 - 2475697 | 17417.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
