Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine dehydrogenase (aminomethyl-transferring) | DI528_11100 | Not Available | Negative | 2401839 - 2404703 | 104104.0 |
| glycine cleavage system protein gcvh | DI528_11105 | Not Available | Negative | 2404700 - 2405062 | 12938.1 |
| glycine cleavage system aminomethyltransferase gcvt | DI528_11110 | Not Available | Negative | 2405249 - 2406412 | 41863.3 |
| duf3008 domain-containing protein | DI528_11115 | Not Available | Negative | 2406742 - 2406924 | 6493.9 |
| hypothetical protein | DI528_11120 | Not Available | Positive | 2407120 - 2407464 | 12071.9 |
| hypothetical protein | DI528_11125 | Not Available | Positive | 2407561 - 2408559 | 34677.0 |
| hypothetical protein | DI528_11130 | Not Available | Negative | 2408746 - 2409021 | 10183.0 |
| protoporphyrinogen oxidase | DI528_11135 | Not Available | Positive | 2409391 - 2409927 | 19941.8 |
| fluoride efflux transporter crcb | DI528_11140 | Not Available | Positive | 2409983 - 2410360 | 12820.2 |
| rlua family pseudouridine synthase | DI528_11145 | Not Available | Positive | 2410471 - 2411466 | 37071.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
