Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yran family protein | DI528_10950 | Not Available | Positive | 2374725 - 2375123 | 14833.0 |
| abc transporter substrate-binding protein | DI528_10955 | Not Available | Positive | 2375249 - 2376547 | 47729.3 |
| glycerol-3-phosphate transporter permease | DI528_10960 | Not Available | Positive | 2376616 - 2377497 | 32783.6 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | DI528_10965 | Not Available | Positive | 2377508 - 2378350 | 31352.2 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | DI528_10970 | Not Available | Positive | 2378365 - 2379480 | 40048.7 |
| cupin | DI528_10975 | Not Available | Positive | 2379628 - 2380128 | 18320.0 |
| glutathione synthase | DI528_10980 | Not Available | Positive | 2380219 - 2381166 | 35206.5 |
| aaa family atpase | DI528_10985 | Not Available | Positive | 2381371 - 2382903 | 53244.6 |
| cysteine synthase a | DI528_10990 | Not Available | Negative | 2382988 - 2383956 | 33647.9 |
| lysine transporter lyse | DI528_10995 | Not Available | Negative | 2384166 - 2384780 | 21520.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
