Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | DI528_10700 | Not Available | Negative | 2327812 - 2328294 | 17847.6 |
| duf2000 domain-containing protein | DI528_10705 | Not Available | Positive | 2328422 - 2328841 | 14714.1 |
| rubrerythrin family protein | DI528_10710 | Not Available | Negative | 2328969 - 2329952 | 36065.3 |
| globin | DI528_10715 | Not Available | Positive | 2330161 - 2330634 | 17228.5 |
| abc transporter substrate-binding protein | DI528_10720 | Not Available | Positive | 2330820 - 2331926 | 40023.5 |
| arac family transcriptional regulator | DI528_10725 | Not Available | Negative | 2332030 - 2332848 | 30909.3 |
| mfs transporter | DI528_10730 | Not Available | Positive | 2332979 - 2334181 | 42777.0 |
| hypothetical protein | DI528_10735 | Not Available | Positive | 2334372 - 2334875 | 18560.9 |
| flavin-nucleotide-binding protein | DI528_10740 | Not Available | Negative | 2335006 - 2335746 | 27026.0 |
| plp-dependent aminotransferase family protein | DI528_10745 | Not Available | Positive | 2335815 - 2337221 | 50188.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
