Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium/proton antiporter | DI528_10600 | Not Available | Positive | 2308941 - 2310776 | 65861.7 |
| phosphoglycerate kinase | DI528_10605 | Not Available | Positive | 2310854 - 2312056 | 41660.9 |
| fructose bisphosphate aldolase | DI528_10610 | Not Available | Positive | 2312351 - 2313247 | 31924.7 |
| hypothetical protein | DI528_10615 | Not Available | Positive | 2313425 - 2313865 | 16434.1 |
| phzf family phenazine biosynthesis protein | DI528_10620 | Not Available | Positive | 2313901 - 2314809 | 32329.8 |
| mfs transporter | DI528_10625 | Not Available | Positive | 2315255 - 2316550 | 45621.6 |
| duf1192 domain-containing protein | DI528_10630 | Not Available | Positive | 2316547 - 2316741 | 7243.51 |
| duf1465 domain-containing protein | DI528_10635 | Not Available | Positive | 2317108 - 2317623 | 18964.6 |
| 50s ribosomal protein l31 | DI528_10640 | Not Available | Negative | 2317786 - 2318007 | 8136.64 |
| abc transporter | DI528_10645 | Not Available | Positive | 2318196 - 2319830 | 58208.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
