Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent hydrolase | DI528_10545 | Not Available | Negative | 2297036 - 2297872 | 30407.8 |
| tigr00282 family metallophosphoesterase | DI528_10550 | Not Available | Negative | 2298002 - 2298826 | 29763.4 |
| 5-formyltetrahydrofolate cyclo-ligase | DI528_10555 | Not Available | Negative | 2298846 - 2299418 | 21106.4 |
| methyl-accepting chemotaxis protein | DI528_10560 | Not Available | Positive | 2299605 - 2301638 | 71056.3 |
| sam-dependent methyltransferase | DI528_10565 | Not Available | Positive | 2302027 - 2303271 | 47661.8 |
| lysine transporter lyse | DI528_10570 | Not Available | Positive | 2303358 - 2303987 | 22150.6 |
| cell division protein zapa | DI528_10580 | Not Available | Negative | 2304276 - 2304650 | 13733.5 |
| duf4164 domain-containing protein | DI528_10585 | Not Available | Negative | 2304713 - 2304985 | 10239.0 |
| transketolase | DI528_10590 | Not Available | Positive | 2305335 - 2307317 | 70804.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DI528_10595 | Not Available | Positive | 2307398 - 2308408 | 35823.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
