Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DI528_10445 | Not Available | Positive | 2277174 - 2277587 | 15716.0 |
| holliday junction branch migration protein ruva | DI528_10450 | Not Available | Positive | 2277600 - 2278217 | 21377.8 |
| holliday junction branch migration dna helicase ruvb | DI528_10455 | Not Available | Positive | 2278311 - 2279351 | 38106.2 |
| metallophosphoesterase | DI528_10460 | Not Available | Positive | 2279352 - 2280275 | 32869.8 |
| damage-inducible protein dinb | DI528_10465 | Not Available | Positive | 2280310 - 2280873 | 21236.2 |
| hypothetical protein | DI528_10470 | Not Available | Positive | 2281069 - 2281401 | 12810.6 |
| udp-glucose 4-epimerase | DI528_10475 | Not Available | Negative | 2281505 - 2282389 | 32011.1 |
| glycosyl transferase | DI528_10480 | Not Available | Negative | 2282386 - 2283255 | 32831.3 |
| nad-dependent dehydratase | DI528_10485 | Not Available | Negative | 2283252 - 2284472 | 45560.4 |
| tol-pal system-associated acyl-coa thioesterase | DI528_10490 | Not Available | Positive | 2284597 - 2285037 | 16729.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
