Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI528_10395 | Not Available | Negative | 2265476 - 2266483 | 35209.8 |
| permease | DI528_10400 | Not Available | Positive | 2266760 - 2267638 | 30744.9 |
| tetr/acrr family transcriptional regulator | DI528_10405 | Not Available | Positive | 2267653 - 2268294 | 23435.4 |
| phosphoglycerate dehydrogenase | DI528_10410 | Not Available | Negative | 2268438 - 2270033 | 56309.4 |
| phosphoserine transaminase | DI528_10415 | Not Available | Negative | 2270121 - 2271299 | 42201.7 |
| hypothetical protein | DI528_10420 | Not Available | Negative | 2271519 - 2272361 | 30201.1 |
| methyl-accepting chemotaxis protein | DI528_10425 | Not Available | Negative | 2272655 - 2274976 | 82414.7 |
| alkane 1-monooxygenase | DI528_10430 | Not Available | Negative | 2275149 - 2276150 | 36388.6 |
| crossover junction endodeoxyribonuclease ruvc | DI528_10435 | Not Available | Positive | 2276347 - 2276859 | 18213.2 |
| abrb/maze/spovt family dna-binding domain-containing protein | DI528_10440 | Not Available | Positive | 2276919 - 2277170 | 9231.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
