Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | DI528_10345 | Not Available | Positive | 2257342 - 2258019 | 24599.6 |
| ribulokinase | DI528_10350 | Not Available | Positive | 2258045 - 2259625 | 56679.7 |
| dipeptide epimerase | DI528_10355 | Not Available | Negative | 2259689 - 2260675 | 34685.0 |
| trna 2-thiouridine(34) synthase mnma | DI528_10360 | Not Available | Positive | 2260875 - 2262071 | 43124.3 |
| Trna-met | Not Available | Not Available | Positive | 2262208 - 2262284 | Not Available |
| hypothetical protein | DI528_10370 | Not Available | Positive | 2262500 - 2262682 | 6724.14 |
| hypothetical protein | DI528_10375 | Not Available | Negative | 2262679 - 2262912 | 8776.71 |
| hypothetical protein | DI528_10380 | Not Available | Negative | 2263121 - 2263870 | 28326.0 |
| hypothetical protein | DI528_10385 | Not Available | Positive | 2264410 - 2264994 | 22261.3 |
| ribulose phosphate epimerase | DI528_10390 | Not Available | Positive | 2265034 - 2265399 | 13108.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
