Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | DI528_10245 | Not Available | Negative | 2235335 - 2235616 | 10609.6 |
| oxygen-independent coproporphyrinogen iii oxidase | DI528_10250 | Not Available | Positive | 2235836 - 2237188 | 49739.3 |
| protein nord | DI528_10255 | Not Available | Negative | 2237273 - 2238860 | 58908.9 |
| 2-keto-gluconate dehydrogenase | DI528_10260 | Not Available | Negative | 2239042 - 2240613 | 57044.4 |
| twin-arginine translocation pathway signal | DI528_10265 | Not Available | Negative | 2240719 - 2241264 | 20041.0 |
| lactoylglutathione lyase | DI528_10270 | Not Available | Negative | 2241396 - 2241791 | 15094.9 |
| dna-binding protein | DI528_10275 | Not Available | Positive | 2242008 - 2242316 | 11270.4 |
| c4-dicarboxylate transporter dcta | DI528_10280 | Not Available | Negative | 2242397 - 2243728 | 46509.1 |
| two-component sensor histidine kinase | DI528_10285 | Not Available | Positive | 2243976 - 2245805 | 65917.7 |
| fis family transcriptional regulator | DI528_10290 | Not Available | Positive | 2245810 - 2247159 | 49840.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
