Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glxa family transcriptional regulator | DI528_10045 | Not Available | Positive | 2187488 - 2188447 | 35145.3 |
| glutamine amidotransferase | DI528_10050 | Not Available | Positive | 2188576 - 2189481 | 32118.2 |
| protein glxc | DI528_10055 | Not Available | Positive | 2189485 - 2190171 | 23839.6 |
| fmn-binding glutamate synthase family protein | DI528_10060 | Not Available | Positive | 2190186 - 2191514 | 47379.7 |
| type iii glutamate--ammonia ligase | DI528_10065 | Not Available | Positive | 2191578 - 2192885 | 48125.0 |
| formyltetrahydrofolate deformylase | DI528_10070 | Not Available | Positive | 2193013 - 2193897 | 32568.1 |
| aminotransferase | DI528_10075 | Not Available | Positive | 2194006 - 2196930 | 105770.0 |
| duf3307 domain-containing protein | DI528_10080 | Not Available | Positive | 2197106 - 2197510 | 14862.3 |
| lysr family transcriptional regulator | DI528_10085 | Not Available | Negative | 2197482 - 2198417 | 34287.3 |
| fad-dependent oxidoreductase | DI528_10090 | Not Available | Positive | 2198623 - 2199906 | 45705.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
