Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | DI528_09995 | Not Available | Positive | 2173301 - 2173552 | 8904.6 |
| acyl-coa dehydrogenase | DI528_10000 | Not Available | Positive | 2173552 - 2174733 | 42474.2 |
| amino acid--[acyl-carrier-protein] ligase | DI528_10005 | Not Available | Positive | 2174739 - 2175647 | 33741.3 |
| duf1839 domain-containing protein | DI528_10010 | Not Available | Positive | 2175638 - 2176621 | 36993.2 |
| beta-mannosidase | DI528_10015 | Not Available | Positive | 2176793 - 2179255 | 90360.0 |
| alpha/beta hydrolase | DI528_10020 | Not Available | Negative | 2179245 - 2181035 | 64238.1 |
| sugar transporter | DI528_10025 | Not Available | Negative | 2181066 - 2182598 | 54207.9 |
| hypothetical protein | DI528_10030 | Not Available | Negative | 2182716 - 2183888 | 43482.6 |
| glycosyl transferase family 1 | DI528_10035 | Not Available | Negative | 2183851 - 2185038 | 43355.8 |
| hypothetical protein | DI528_10040 | Not Available | Positive | 2185375 - 2187390 | 72361.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
