Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | DI528_09545 | Not Available | Negative | 2074009 - 2074410 | 15121.1 |
| helicase | DI528_09550 | Not Available | Negative | 2074407 - 2077487 | 112556.0 |
| duf3309 domain-containing protein | DI528_09555 | Not Available | Positive | 2078086 - 2078241 | 5463.25 |
| glycine zipper 2tm domain-containing protein | DI528_09560 | Not Available | Positive | 2078268 - 2078522 | 8420.22 |
| beta-ketoacyl-acp reductase | DI528_09565 | Not Available | Negative | 2078978 - 2079703 | 25479.5 |
| acetyl-coa c-acetyltransferase | DI528_09570 | Not Available | Negative | 2079849 - 2081030 | 40491.9 |
| polyhydroxyalkanoate synthesis repressor phar | DI528_09575 | Not Available | Positive | 2081261 - 2081836 | 22001.6 |
| hypothetical protein | DI528_09580 | Not Available | Negative | 2081917 - 2082324 | 14367.4 |
| 50s ribosomal protein l32 | DI528_09585 | Not Available | Negative | 2082455 - 2082640 | 6892.37 |
| glutathione s-transferase | DI528_09590 | Not Available | Negative | 2082799 - 2083446 | 24230.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
