Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbl | DI528_08865 | Not Available | Negative | 1935550 - 1936908 | 44827.1 |
| conjugal transfer protein trbk | DI528_08870 | Not Available | Negative | 1936911 - 1937164 | 8926.52 |
| hypothetical protein | DI528_08875 | Not Available | Negative | 1937384 - 1938439 | 38175.8 |
| hypothetical protein | DI528_08880 | Not Available | Positive | 1938712 - 1939011 | 11370.8 |
| duf1254 domain-containing protein | DI528_08885 | Not Available | Negative | 1939098 - 1939646 | 19589.6 |
| hypothetical protein | DI528_08890 | Not Available | Negative | 1939639 - 1940226 | 20388.5 |
| hypothetical protein | DI528_08895 | Not Available | Positive | 1940558 - 1941304 | 29043.6 |
| ggdef domain-containing protein | DI528_08900 | Not Available | Negative | 1941665 - 1942861 | 44524.6 |
| penicillin-binding protein | DI528_08905 | Not Available | Negative | 1943071 - 1945278 | 80947.8 |
| ycgn family cysteine cluster protein | DI528_08910 | Not Available | Positive | 1945487 - 1945951 | 17397.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
