Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl 1,2-cyclic phosphodiesterase | DI528_08705 | Not Available | Negative | 1908441 - 1909253 | 30056.9 |
| luxr family transcriptional regulator | DI528_08710 | Not Available | Negative | 1909250 - 1910032 | 28685.3 |
| methionine--trna ligase | DI528_08715 | Not Available | Negative | 1910038 - 1911594 | 58016.9 |
| dna polymerase iii subunit delta' | DI528_08720 | Not Available | Negative | 1911734 - 1912762 | 36783.9 |
| dtmp kinase | DI528_08725 | Not Available | Negative | 1912759 - 1913451 | 24926.9 |
| d-alanyl-d-alanine carboxypeptidase | DI528_08730 | Not Available | Negative | 1913562 - 1914719 | 42229.8 |
| septal ring lytic transglycosylase rlpa family protein | DI528_08735 | Not Available | Negative | 1914776 - 1915822 | 37028.4 |
| Trna-ser | Not Available | Not Available | Positive | 1916151 - 1916240 | Not Available |
| recombinase family protein | DI528_08745 | Not Available | Negative | 1916208 - 1917860 | 62113.7 |
| transcriptional regulator | DI528_08750 | Not Available | Negative | 1917857 - 1918246 | 14566.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
