Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | DI528_08650 | Not Available | Positive | 1897221 - 1900040 | 104234.0 |
| pantetheine-phosphate adenylyltransferase | DI528_08655 | Not Available | Positive | 1901066 - 1901560 | 17431.2 |
| peptidylprolyl isomerase | DI528_08660 | Not Available | Positive | 1901593 - 1902162 | 20186.1 |
| peptidylprolyl isomerase | DI528_08665 | Not Available | Positive | 1902195 - 1902704 | 18498.9 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DI528_08670 | Not Available | Positive | 1902780 - 1903865 | 39284.8 |
| trna guanosine(34) transglycosylase tgt | DI528_08675 | Not Available | Positive | 1903870 - 1905000 | 41907.9 |
| hypothetical protein | DI528_08680 | Not Available | Positive | 1905188 - 1906360 | 41278.9 |
| recombination regulator recx | DI528_08685 | Not Available | Positive | 1906357 - 1906920 | 21099.3 |
| 4-hydroxy-2-oxoheptanedioate aldolase | DI528_08690 | Not Available | Positive | 1907019 - 1907825 | 28553.4 |
| qace family quaternary ammonium compound efflux smr transporter | DI528_08700 | Not Available | Negative | 1908040 - 1908360 | 11090.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
