Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-binding protein | DI528_08055 | Not Available | Positive | 1772330 - 1772758 | 15378.6 |
| hypothetical protein | DI528_08060 | Not Available | Negative | 1772785 - 1773213 | 15651.5 |
| o-acetylhomoserine aminocarboxypropyltransferase | DI528_08065 | Not Available | Positive | 1773380 - 1774663 | 45613.4 |
| cupin domain-containing protein | DI528_08070 | Not Available | Positive | 1774713 - 1775057 | 12902.1 |
| hypothetical protein | DI528_08075 | Not Available | Negative | 1775084 - 1775797 | 25376.8 |
| cida/lrga family protein | DI528_08080 | Not Available | Negative | 1775769 - 1776191 | 15060.3 |
| lysr family transcriptional regulator | DI528_08085 | Not Available | Positive | 1776288 - 1777178 | 33138.4 |
| marr family transcriptional regulator | DI528_08090 | Not Available | Positive | 1777284 - 1777706 | 15259.6 |
| mfs transporter | DI528_08095 | Not Available | Positive | 1777766 - 1779064 | 46286.4 |
| cytochrome p450 | DI528_08100 | Not Available | Negative | 1779081 - 1780325 | 47215.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
