Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol-cytochrome c chaperone | DI528_07905 | Not Available | Positive | 1744469 - 1745014 | 20154.3 |
| metal-binding protein | DI528_07910 | Not Available | Positive | 1745016 - 1745573 | 20177.9 |
| phosphate acyltransferase plsx | DI528_07915 | Not Available | Positive | 1745673 - 1746719 | 37354.2 |
| 3-oxoacyl-acp synthase | DI528_07920 | Not Available | Positive | 1746741 - 1747712 | 34176.9 |
| integration host factor subunit alpha | DI528_07925 | Not Available | Positive | 1747822 - 1748160 | 12480.1 |
| merr family transcriptional regulator | DI528_07930 | Not Available | Positive | 1748283 - 1748816 | 19856.8 |
| hypothetical protein | DI528_07935 | Not Available | Negative | 1748855 - 1749478 | 22873.8 |
| Trna-pro | Not Available | Not Available | Positive | 1749826 - 1749902 | Not Available |
| polyhydroxybutyrate depolymerase | DI528_07945 | Not Available | Positive | 1750163 - 1751179 | 37301.2 |
| hypothetical protein | DI528_07950 | Not Available | Negative | 1751531 - 1751827 | 10248.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
