Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | DI528_07555 | Not Available | Negative | 1672770 - 1673084 | 11046.2 |
| pyrroloquinoline quinone biosynthesis protein c | DI528_07560 | Not Available | Negative | 1673081 - 1673860 | 28953.2 |
| pyrroloquinoline quinone biosynthesis protein pqqb | DI528_07565 | Not Available | Negative | 1673844 - 1674782 | 33213.1 |
| pyrroloquinoline quinone precursor peptide pqqa | DI528_07570 | Not Available | Negative | 1674804 - 1674899 | 3516.23 |
| hypothetical protein | DI528_07575 | Not Available | Positive | 1675264 - 1675701 | 15125.8 |
| bioy family transporter | DI528_07580 | Not Available | Negative | 1675766 - 1676329 | 18860.3 |
| transporter | DI528_07585 | Not Available | Negative | 1676393 - 1676995 | 21236.7 |
| cobalt abc transporter atp-binding protein | DI528_07590 | Not Available | Negative | 1676992 - 1677672 | 24121.2 |
| hypothetical protein | DI528_07595 | Not Available | Positive | 1678043 - 1679233 | 45932.8 |
| gnat family n-acetyltransferase | DI528_07600 | Not Available | Positive | 1679255 - 1679671 | 15058.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
