Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI528_07500 | Not Available | Negative | 1659419 - 1660729 | 47492.5 |
| abc transporter atp-binding protein | DI528_07505 | Not Available | Negative | 1660726 - 1661484 | 26865.6 |
| abc transporter permease | DI528_07510 | Not Available | Negative | 1661481 - 1662533 | 36389.7 |
| abc transporter substrate-binding protein | DI528_07515 | Not Available | Negative | 1662535 - 1663623 | 39503.2 |
| bestrophin | DI528_07520 | Not Available | Positive | 1663903 - 1664829 | 34584.8 |
| ggdef-domain containing protein | DI528_07525 | Not Available | Positive | 1665061 - 1667073 | 72864.6 |
| ai-2e family transporter | DI528_07530 | Not Available | Negative | 1667088 - 1668230 | 41029.4 |
| hypothetical protein | DI528_07535 | Not Available | Positive | 1668444 - 1669931 | 53587.3 |
| sorbosone dehydrogenase | DI528_07545 | Not Available | Negative | 1670158 - 1671453 | 46263.2 |
| pyrroloquinoline quinone biosynthesis protein pqqe | DI528_07550 | Not Available | Negative | 1671640 - 1672773 | 40782.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
