Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | DI528_00175 | Not Available | Positive | 31180 - 31647 | 17573.6 |
| nitrogen fixation protein fixf | DI528_00185 | Not Available | Negative | 32460 - 33689 | 46342.1 |
| glycosyl transferase family 1 | DI528_00190 | Not Available | Negative | 33686 - 34750 | 39069.2 |
| transcription elongation factor grea | DI528_00195 | Not Available | Negative | 34772 - 35248 | 17349.3 |
| duf2235 domain-containing protein | DI528_00200 | Not Available | Negative | 35452 - 36693 | 46646.6 |
| carbamoyl phosphate synthase large subunit | DI528_00210 | Not Available | Negative | 38427 - 41909 | 125918.0 |
| duf1868 domain-containing protein | DI528_00215 | Not Available | Positive | 42170 - 42904 | 27609.8 |
| flagellar biosynthesis protein flgm | DI528_00220 | Not Available | Positive | 43117 - 44046 | 33805.9 |
| mate family efflux transporter | DI528_00225 | Not Available | Positive | 44448 - 45848 | 49787.6 |
| carbamoyl phosphate synthase small subunit | DI528_00230 | Not Available | Negative | 45885 - 47090 | 43041.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
