Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surfeit locus 1 family protein | DI528_07395 | Not Available | Negative | 1641311 - 1642093 | 29582.2 |
| cytochrome o ubiquinol oxidase subunit iv | DI528_07400 | Not Available | Negative | 1642147 - 1642617 | 16662.4 |
| cytochrome o ubiquinol oxidase subunit iii | DI528_07405 | Not Available | Negative | 1642614 - 1643237 | 22738.0 |
| cytochrome o ubiquinol oxidase subunit i | DI528_07410 | Not Available | Negative | 1643234 - 1645219 | 74133.1 |
| ubiquinol oxidase subunit ii | DI528_07415 | Not Available | Negative | 1645209 - 1646327 | 40942.5 |
| s9 family peptidase | DI528_07420 | Not Available | Positive | 1646809 - 1648917 | 78514.6 |
| hypothetical protein | DI528_07425 | Not Available | Positive | 1648983 - 1649504 | 18205.2 |
| hypothetical protein | DI528_07430 | Not Available | Positive | 1649719 - 1650027 | 11180.7 |
| merr family transcriptional regulator | DI528_07435 | Not Available | Positive | 1650168 - 1650581 | 15734.7 |
| cupin | DI528_07440 | Not Available | Positive | 1650592 - 1651050 | 16658.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
