Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI528_07345 | Not Available | Negative | 1633474 - 1633905 | 14869.3 |
| atp-binding protein | DI528_07350 | Not Available | Positive | 1634088 - 1635677 | 57412.4 |
| hypothetical protein | DI528_07355 | Not Available | Negative | 1635731 - 1636132 | 15334.3 |
| acetoin utilization protein | DI528_07360 | Not Available | Positive | 1636306 - 1637241 | 34322.4 |
| exodeoxyribonuclease vii small subunit | DI528_07365 | Not Available | Positive | 1637244 - 1637498 | 9316.01 |
| hypothetical protein | DI528_07370 | Not Available | Positive | 1637530 - 1638162 | 22705.4 |
| duf982 domain-containing protein | DI528_07375 | Not Available | Negative | 1638322 - 1638567 | 8582.14 |
| trans-aconitate 2-methyltransferase | DI528_07380 | Not Available | Negative | 1638638 - 1639408 | 28349.9 |
| haloacid dehalogenase type ii | DI528_07385 | Not Available | Negative | 1639463 - 1640116 | 24353.8 |
| branched-chain amino acid aminotransferase | DI528_07390 | Not Available | Positive | 1640386 - 1641273 | 32320.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
