Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | DI528_06030 | Not Available | Positive | 1351600 - 1352175 | 20945.7 |
| hypothetical protein | DI528_06040 | Not Available | Positive | 1353239 - 1353427 | 6758.84 |
| marr family transcriptional regulator | DI528_06050 | Not Available | Negative | 1354117 - 1354539 | 15573.9 |
| replicative dna helicase | DI528_06055 | Not Available | Positive | 1354927 - 1356423 | 54961.5 |
| rhodanese | DI528_06060 | Not Available | Negative | 1356533 - 1356934 | 14129.8 |
| transcriptional regulator ftra | DI528_06065 | Not Available | Positive | 1356999 - 1358027 | 37137.6 |
| arac family transcriptional regulator | DI528_06070 | Not Available | Negative | 1358054 - 1358911 | 32203.1 |
| alanine racemase | DI528_06075 | Not Available | Positive | 1359001 - 1360164 | 41289.5 |
| dna repair protein rada | DI528_06080 | Not Available | Positive | 1360263 - 1361669 | 49516.5 |
| cvpa family protein | DI528_06085 | Not Available | Positive | 1361760 - 1362362 | 21434.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
