Methanobrevibacter sp. A54

Gram-positiveRod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanobacteria

Order

Methanobacteriales

Family

Methanobacteriaceae

Genus

Methanobrevibacter

Description

Methanobrevibacter sp. A54 is a Gram-positive, rod-shaped archaeon classified within the Methanobrevibacter genus. It is characterized by having a single replicon, which is indicative of its genomic structure. The organism is cataloged under the accession number MAIE00000000.1, allowing for its identification and further study in microbial databases. As a member of the Methanobrevibacter genus, Methanobrevibacter sp. A54 plays a significant role in the methanogenic processes, contributing to methane production in various anaerobic environments. Methanogens are crucial in the carbon cycle, particularly in environments such as wetlands, digestive tracts of ruminants, and certain industrial processes that involve anaerobic digestion. The presence of Methanobrevibacter sp. A54 in these habitats suggests that it may be involved in the breakdown of organic materials, leading to the conversion of carbon substrates into methane. The ecological insight derived from studying Methanobrevibacter sp. A54 highlights the importance of methanogenic archaea in maintaining ecological balance and energy flow within anaerobic ecosystems. Understanding its specific functions and interactions within these environments can provide valuable knowledge about methane production and its implications for greenhouse gas emissions and climate change.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanobacteria
OrderMethanobacteriales
FamilyMethanobacteriaceae
GenusMethanobrevibacter
SpeciesMethanobrevibacter sp. A54
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanobrevibacter sp. A54


Gene Summary

Adenine Count

588341 bp

Thymine Count

587912 bp

Guanine Count

267845 bp

Cytosine Count

268142 bp

Genome Length

1712240 bp

Protein-coding Genes

1615 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated endonuclease cas1A9757_07840Not AvailablePositive1 - 66725707.3
23s ribosomal rnaNot AvailableNot AvailablePositive110 - 3004Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive1657 - 3141Not Available
short-chain dehydrogenaseA9757_07845Not AvailableNegative1106 - 190928994.3
5,10-methylenetetrahydromethanopterin reductaseA9757_07855Not AvailableNegative3286 - 425133604.2
hypothetical proteinA9757_07865Not AvailableNegative6448 - 677413052.8
hypothetical proteinA9757_07870Not AvailableNegative6831 - 845962724.3
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive9797 - 10077Not Available
phage capsid proteinA9757_07875Not AvailableNegative8456 - 986253740.2
large terminase subunitA9757_07880Not AvailableNegative9865 - 1122353419.4

Displaying genes 1 – 10 of 1651 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

10 records
Metabolite IDMetabolite nameStructureCAS number
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002033L-altrarateC6H8O8Chemical structure of L-altrarateNot available
Average208.123Da
Monoisotopic208.0230144Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm00021245-dehydro-4-deoxy-D-glucarateC6H6O7Chemical structure of 5-dehydro-4-deoxy-D-glucarateNot available
Average190.1076Da
Monoisotopic190.0113525Da
BASm00028782-oxo-3-sulfanylpropanoateC3H3O3SChemical structure of 2-oxo-3-sulfanylpropanoateNot available
Average119.11Da
Monoisotopic118.9808387Da
BASm00033572-oxo-2H-pyran-4,6-dicarboxylateC7H2O6Chemical structure of 2-oxo-2H-pyran-4,6-dicarboxylateNot available
Average182.088Da
Monoisotopic181.9862349Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0011787(S)-2-hydroxymethylglutarateC6H8O5Chemical structure of (S)-2-hydroxymethylglutarateNot available
Average160.126Da
Monoisotopic160.038270517Da

Displaying 1–10 of 10 metabolites

Health Effects

No health effects information available for this bacterium.