Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3CP3RA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394987 bp
Thymine Count
1407271 bp
Guanine Count
1074684 bp
Cytosine Count
1049406 bp
Genome Length
4929248 bp
Protein-coding Genes
3987 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polygalacturonase | SAMN05216357_10368 | Not Available | Positive | 1125643 - 1127319 | 62130.9 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN05216357_10369 | Not Available | Positive | 1127395 - 1128582 | 45675.1 |
| pectate lyase | SAMN05216357_10370 | Not Available | Positive | 1128640 - 1130298 | 61699.0 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | SAMN05216357_10371 | Not Available | Positive | 1130726 - 1131568 | 31986.0 |
| gluconate 5-dehydrogenase | SAMN05216357_10372 | Not Available | Positive | 1131643 - 1132434 | 28237.1 |
| protein of unknown function | SAMN05216357_10373 | Not Available | Positive | 1132623 - 1133762 | 41924.4 |
| 2-dehydro-3-deoxygluconokinase | SAMN05216357_10374 | Not Available | Positive | 1133764 - 1134801 | 38111.6 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN05216357_10375 | Not Available | Positive | 1135007 - 1135675 | 24382.6 |
| mfs transporter, acs family, hexuronate transporter | SAMN05216357_10376 | Not Available | Positive | 1135740 - 1137206 | 54049.2 |
| hypothetical protein | SAMN05216357_10377 | Not Available | Positive | 1137249 - 1137371 | 4658.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
