Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3CP3RA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394987 bp
Thymine Count
1407271 bp
Guanine Count
1074684 bp
Cytosine Count
1049406 bp
Genome Length
4929248 bp
Protein-coding Genes
3987 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05216357_10241 | Not Available | Positive | 577790 - 581131 | 122287.0 |
| starch-binding associating with outer membrane | SAMN05216357_10242 | Not Available | Positive | 581159 - 582634 | 56197.6 |
| beta-galactosidase/beta-glucuronidase | SAMN05216357_10243 | Not Available | Positive | 582908 - 585679 | 105641.0 |
| rhamnogalacturonyl hydrolase yesr | SAMN05216357_10244 | Not Available | Positive | 585714 - 586808 | 42237.1 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN05216357_10245 | Not Available | Negative | 586892 - 589438 | 95524.0 |
| hypothetical protein | SAMN05216357_10246 | Not Available | Negative | 589535 - 589756 | 8421.64 |
| predicted purr-regulated permease perm | SAMN05216357_10247 | Not Available | Negative | 589790 - 590917 | 42322.3 |
| hypothetical protein | SAMN05216357_10248 | Not Available | Negative | 591040 - 591270 | 8673.39 |
| hypothetical protein | SAMN05216357_10249 | Not Available | Positive | 591488 - 592243 | 27376.0 |
| prolyl oligopeptidase family protein | SAMN05216357_10250 | Not Available | Positive | 592341 - 594773 | 92400.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
