Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3CP3RA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394987 bp
Thymine Count
1407271 bp
Guanine Count
1074684 bp
Cytosine Count
1049406 bp
Genome Length
4929248 bp
Protein-coding Genes
3987 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216357_101400 | Not Available | Negative | 466753 - 468615 | 70613.4 |
| starch-binding associating with outer membrane | SAMN05216357_101401 | Not Available | Negative | 468627 - 470240 | 61749.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216357_101402 | Not Available | Negative | 470251 - 473565 | 124419.0 |
| hypothetical protein | SAMN05216357_101403 | Not Available | Negative | 473580 - 473699 | 4496.65 |
| fecr protein | SAMN05216357_101404 | Not Available | Negative | 473729 - 474913 | 45206.3 |
| uncharacterized membrane protein hded, duf308 family | SAMN05216357_101405 | Not Available | Positive | 475257 - 475826 | 21141.9 |
| rna polymerase sigma factor, sigma-70 family | SAMN05216357_101406 | Not Available | Negative | 475832 - 476380 | 21258.5 |
| pd-(d/e)xk nuclease superfamily protein | SAMN05216357_101407 | Not Available | Positive | 476708 - 479710 | 115823.0 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05216357_101408 | Not Available | Negative | 479688 - 480350 | 24868.6 |
| uncharacterized lipoprotein nlpe involved in copper resistance | SAMN05216357_101409 | Not Available | Negative | 480428 - 481243 | 30446.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
