Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3CP3RA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394987 bp
Thymine Count
1407271 bp
Guanine Count
1074684 bp
Cytosine Count
1049406 bp
Genome Length
4929248 bp
Protein-coding Genes
3987 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05216357_101340 | Not Available | Positive | 392029 - 393222 | 44021.9 |
| gscfa family protein | SAMN05216357_101341 | Not Available | Positive | 393693 - 394667 | 37961.5 |
| alanine racemase | SAMN05216357_101342 | Not Available | Positive | 394807 - 397275 | 93288.8 |
| ompa family protein | SAMN05216357_101343 | Not Available | Negative | 397336 - 398493 | 42921.1 |
| rna polymerase primary sigma factor | SAMN05216357_101344 | Not Available | Negative | 398773 - 399633 | 32784.3 |
| do/deqq family serine protease | SAMN05216357_101345 | Not Available | Negative | 399843 - 401372 | 54739.4 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05216357_101346 | Not Available | Negative | 401637 - 402794 | 45039.0 |
| diaminopimelate decarboxylase | SAMN05216357_101347 | Not Available | Negative | 402801 - 403958 | 43091.9 |
| trna dimethylallyltransferase | SAMN05216357_101348 | Not Available | Negative | 404105 - 405028 | 35089.2 |
| uncharacterized protein | SAMN05216357_101349 | Not Available | Negative | 405030 - 405827 | 27998.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
