Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3CP3RA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394987 bp
Thymine Count
1407271 bp
Guanine Count
1074684 bp
Cytosine Count
1049406 bp
Genome Length
4929248 bp
Protein-coding Genes
3987 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05216357_10398 | Not Available | Positive | 1158080 - 1160755 | 101472.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216357_10399 | Not Available | Positive | 1160911 - 1164120 | 120051.0 |
| starch-binding associating with outer membrane | SAMN05216357_103100 | Not Available | Positive | 1164164 - 1166128 | 75118.8 |
| protein of unknown function | SAMN05216357_103101 | Not Available | Positive | 1166148 - 1167347 | 44715.7 |
| protein of unknown function | SAMN05216357_103102 | Not Available | Positive | 1167367 - 1168584 | 45315.5 |
| glycosyl hydrolases family 38 n-terminal domain-containing protein | SAMN05216357_103103 | Not Available | Positive | 1168654 - 1171725 | 117074.0 |
| alpha-1,2-mannosidase, putative | SAMN05216357_103104 | Not Available | Positive | 1171725 - 1174871 | 119497.0 |
| fucose permease | SAMN05216357_103105 | Not Available | Positive | 1174914 - 1176080 | 42451.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216357_103106 | Not Available | Positive | 1176481 - 1179711 | 120197.0 |
| starch-binding associating with outer membrane | SAMN05216357_103107 | Not Available | Positive | 1179744 - 1181357 | 60079.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
