Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3CP3RA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394987 bp
Thymine Count
1407271 bp
Guanine Count
1074684 bp
Cytosine Count
1049406 bp
Genome Length
4929248 bp
Protein-coding Genes
3987 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05216357_10139 | Not Available | Positive | 38480 - 41782 | 122429.0 |
| starch-binding associating with outer membrane | SAMN05216357_10140 | Not Available | Positive | 41795 - 43594 | 69237.8 |
| dna-binding transcriptional regulator, marr family | SAMN05216357_10141 | Not Available | Positive | 44025 - 44459 | 16382.2 |
| glutathione peroxidase | SAMN05216357_10142 | Not Available | Positive | 44466 - 45062 | 22266.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05216357_10143 | Not Available | Negative | 45151 - 45882 | 27770.2 |
| mfs transporter, dha1 family, l-arabinose/isopropyl-beta-d-thiogalactopyranoside export protein | SAMN05216357_10144 | Not Available | Negative | 46069 - 47295 | 44107.4 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05216357_10145 | Not Available | Positive | 47666 - 48418 | 26992.4 |
| hypothetical protein | SAMN05216357_10146 | Not Available | Positive | 48499 - 48669 | 6496.69 |
| helix-turn-helix domain-containing protein | SAMN05216357_10147 | Not Available | Positive | 48721 - 49638 | 35803.7 |
| dna-3-methyladenine glycosylase i | SAMN05216357_10148 | Not Available | Positive | 49613 - 50194 | 22683.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
