Pseudomonas sp. 37 R 15

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 37 R 15 is characterized by having a single replicon, which is a defining trait of its genomic structure. This bacterium is cataloged under the accession number CVTV00000000.1, facilitating its identification and further study within microbial databases. The single replicon indicates a streamlined genomic organization, potentially influencing its adaptability and metabolic capabilities. This genus, Pseudomonas, is known for its diverse metabolic pathways, allowing it to thrive in various environments, including soil, water, and clinical settings. Members of this genus often exhibit significant versatility in utilizing different carbon sources, which can also contribute to their ecological resilience. Understanding the genomic organization of Pseudomonas sp. 37 R 15 may provide insights into its ecological roles and interactions within its environment. The presence of a single replicon can be indicative of a stable genetic framework, potentially aiding in its survival and competitive advantage in diverse ecological niches. Further investigations into its metabolic pathways and environmental interactions could elucidate its role in biogeochemical cycles and its potential applications in bioremediation or other biotechnological fields.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 37 R 15
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 37 R 15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 37 R 15


Gene Summary

Adenine Count

1245425 bp

Thymine Count

1256838 bp

Guanine Count

1915180 bp

Cytosine Count

1895202 bp

Genome Length

6315439 bp

Protein-coding Genes

5619 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chemotaxis protein cheaNONENot AvailableNegative548 - 159738266.9
cell wall-associated polypeptide cwbp200NONENot AvailablePositive2467 - 357342289.3
hypothetical proteinNONENot AvailablePositive3570 - 398015482.5
exodeoxyribonuclease 7 small subunitNONENot AvailablePositive4506 - 47488906.36
farnesyl diphosphate synthaseNONENot AvailablePositive4745 - 563231301.5
1-deoxy-d-xylulose-5-phosphate synthaseNONENot AvailablePositive5743 - 764168241.3
outer membrane cobalamin translocatorNONENot AvailablePositive7779 - 965369507.2
vitamin b12-binding protein precursorNONENot AvailableNegative9744 - 1052929149.6
hypothetical proteinNONENot AvailableNegative10526 - 1094515402.4
gtp cyclohydrolase-2NONENot AvailableNegative10942 - 1155922273.9

Displaying genes 1 – 10 of 5619 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

38 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00008001,8-diazacyclotetradecane-2,9-dioneC12H22N2O2Chemical structure of 1,8-diazacyclotetradecane-2,9-dioneNot available
Average226.32Da
Monoisotopic226.168127956Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da

Displaying 1–10 of 38 metabolites

Health Effects

No health effects information available for this bacterium.