Xanthomonas nasturtii str. WHRI 8984

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas nasturtii strain WHRI 8984 is a Gram-negative bacterium characterized by its rod shape and motility, facilitated by the presence of flagella. This strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in its ecological niche. Xanthomonas nasturtii specifically interacts with its host, Nasturtium officinale, commonly known as watercress. This relationship underscores the bacterium's potential role in the plant's health and disease dynamics. Given its specialized host association, Xanthomonas nasturtii may have evolved mechanisms to thrive within the plant, possibly impacting the plant's physiology or resistance to other pathogens. The accession number QUZM00000000.1 serves as a reference for genomic data related to this strain, allowing for further research into its characteristics and behaviors. Understanding the specific interactions and mechanisms of Xanthomonas nasturtii with Nasturtium officinale could provide insights into plant-microbe relationships and the ecological roles of bacteria in agricultural systems. As such, Xanthomonas nasturtii str. WHRI 8984 exemplifies the intricate connections within ecosystems and highlights the importance of studying microbial interactions with specific plant hosts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas nasturtii
StrainWHRI 8984

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas nasturtii str. WHRI 8984
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Nasturtium officinale
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas nasturtii str. WHRI 8984


Gene Summary

Adenine Count

842960 bp

Thymine Count

847260 bp

Guanine Count

1538774 bp

Cytosine Count

1542669 bp

Genome Length

4771852 bp

Protein-coding Genes

3985 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive44 - 158Not Available
is630 family transposaseDZD52_00005Not AvailableNegative1 - 30511389.1
23s ribosomal rnaNot AvailableNot AvailablePositive322 - 3218Not Available
Ncrna_class:otherNot AvailableNot AvailablePositive1237 - 1310Not Available
duf429 domain-containing proteinDZD52_00015Not AvailablePositive1593 - 230925248.2
Ncrna_class:otherNot AvailableNot AvailablePositive1769 - 1845Not Available
Ncrna_class:otherNot AvailableNot AvailablePositive2909 - 2984Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive3703 - 5348Not Available
alpha-ketoglutarate-dependent dioxygenase alkbDZD52_00025Not AvailablePositive4850 - 547923037.8
Ncrna_class:otherNot AvailableNot AvailablePositive5331 - 5407Not Available

Displaying genes 1 – 10 of 4089 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.