Xanthomonas nasturtii str. WHRI 8984

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas nasturtii strain WHRI 8984 is a Gram-negative bacterium characterized by its rod shape and motility, facilitated by the presence of flagella. This strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in its ecological niche. Xanthomonas nasturtii specifically interacts with its host, Nasturtium officinale, commonly known as watercress. This relationship underscores the bacterium's potential role in the plant's health and disease dynamics. Given its specialized host association, Xanthomonas nasturtii may have evolved mechanisms to thrive within the plant, possibly impacting the plant's physiology or resistance to other pathogens. The accession number QUZM00000000.1 serves as a reference for genomic data related to this strain, allowing for further research into its characteristics and behaviors. Understanding the specific interactions and mechanisms of Xanthomonas nasturtii with Nasturtium officinale could provide insights into plant-microbe relationships and the ecological roles of bacteria in agricultural systems. As such, Xanthomonas nasturtii str. WHRI 8984 exemplifies the intricate connections within ecosystems and highlights the importance of studying microbial interactions with specific plant hosts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas nasturtii
StrainWHRI 8984

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas nasturtii str. WHRI 8984
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Nasturtium officinale
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas nasturtii strain WHRI 8984 scf_5921_161, whole genome

Gene Summary

Adenine Count

842960 bp

Thymine Count

847260 bp

Guanine Count

1538774 bp

Cytosine Count

1542669 bp

Genome Length

4771852 bp

Protein-coding Genes

3985 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
beta-ketoacyl-acp reductaseDZD52_02665Not AvailablePositive571814 - 57255426623.7
polyhydroxyalkanoate synthesis repressor pharDZD52_02670Not AvailablePositive572714 - 57328921167.1
trab/gumn family proteinDZD52_02680Not AvailableNegative573492 - 57446635640.8
duf1684 domain-containing proteinDZD52_02685Not AvailableNegative574500 - 57539932450.6
dna mismatch repair endonuclease mutlDZD52_02690Not AvailableNegative575435 - 57730667371.8
n-acetylmuramoyl-l-alanine amidaseDZD52_02695Not AvailableNegative577444 - 57917458147.4
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeDZD52_02700Not AvailableNegative579227 - 57972717787.2
nad(p)h-hydrate dehydrataseDZD52_02705Not AvailableNegative579724 - 58121150650.7
trna epoxyqueuosine(34) reductase quegDZD52_02710Not AvailablePositive581236 - 58230339816.6
exodeoxyribonuclease vii large subunitDZD52_02715Not AvailablePositive582451 - 58378849245.2

Displaying genes 541 – 550 of 4089 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.