Xanthomonas nasturtii str. WHRI 8984

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas nasturtii strain WHRI 8984 is a Gram-negative bacterium characterized by its rod shape and motility, facilitated by the presence of flagella. This strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in its ecological niche. Xanthomonas nasturtii specifically interacts with its host, Nasturtium officinale, commonly known as watercress. This relationship underscores the bacterium's potential role in the plant's health and disease dynamics. Given its specialized host association, Xanthomonas nasturtii may have evolved mechanisms to thrive within the plant, possibly impacting the plant's physiology or resistance to other pathogens. The accession number QUZM00000000.1 serves as a reference for genomic data related to this strain, allowing for further research into its characteristics and behaviors. Understanding the specific interactions and mechanisms of Xanthomonas nasturtii with Nasturtium officinale could provide insights into plant-microbe relationships and the ecological roles of bacteria in agricultural systems. As such, Xanthomonas nasturtii str. WHRI 8984 exemplifies the intricate connections within ecosystems and highlights the importance of studying microbial interactions with specific plant hosts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas nasturtii
StrainWHRI 8984

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas nasturtii str. WHRI 8984
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Nasturtium officinale
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas nasturtii strain WHRI 8984 scf_5921_161, whole genome

Gene Summary

Adenine Count

842960 bp

Thymine Count

847260 bp

Guanine Count

1538774 bp

Cytosine Count

1542669 bp

Genome Length

4771852 bp

Protein-coding Genes

3985 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
grx4 family monothiol glutaredoxinDZD52_21160Not AvailablePositive4661594 - 466252032984.2
is5/is1182 family transposaseDZD52_21165Not AvailableNegative4662572 - 46626874612.81
site-specific integraseDZD52_21170Not AvailablePositive4662794 - 466380738818.9
adenylate/guanylate cyclase domain-containing proteinDZD52_21175Not AvailableNegative4663894 - 466458925864.8
cyclic nucleotide-binding proteinDZD52_21180Not AvailableNegative4664597 - 466550833762.6
xre family transcriptional regulatorDZD52_21185Not AvailableNegative4665878 - 466620411864.6
hypothetical proteinDZD52_21190Not AvailablePositive4666309 - 466706126529.4
hypothetical proteinDZD52_21195Not AvailablePositive4667104 - 466741810957.0
hypothetical proteinDZD52_21200Not AvailablePositive4667628 - 46677173479.24
hypothetical proteinDZD52_21205Not AvailableNegative4667789 - 466817213625.1

Displaying genes 3961 – 3970 of 4089 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.