Xanthomonas nasturtii str. WHRI 8984

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas nasturtii strain WHRI 8984 is a Gram-negative bacterium characterized by its rod shape and motility, facilitated by the presence of flagella. This strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in its ecological niche. Xanthomonas nasturtii specifically interacts with its host, Nasturtium officinale, commonly known as watercress. This relationship underscores the bacterium's potential role in the plant's health and disease dynamics. Given its specialized host association, Xanthomonas nasturtii may have evolved mechanisms to thrive within the plant, possibly impacting the plant's physiology or resistance to other pathogens. The accession number QUZM00000000.1 serves as a reference for genomic data related to this strain, allowing for further research into its characteristics and behaviors. Understanding the specific interactions and mechanisms of Xanthomonas nasturtii with Nasturtium officinale could provide insights into plant-microbe relationships and the ecological roles of bacteria in agricultural systems. As such, Xanthomonas nasturtii str. WHRI 8984 exemplifies the intricate connections within ecosystems and highlights the importance of studying microbial interactions with specific plant hosts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas nasturtii
StrainWHRI 8984

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas nasturtii str. WHRI 8984
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Nasturtium officinale
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas nasturtii strain WHRI 8984 scf_5921_161, whole genome

Gene Summary

Adenine Count

842960 bp

Thymine Count

847260 bp

Guanine Count

1538774 bp

Cytosine Count

1542669 bp

Genome Length

4771852 bp

Protein-coding Genes

3985 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
general secretion pathway protein gsphDZD52_19920Not AvailableNegative4412181 - 441272919886.8
excinuclease abc subunit uvrbDZD52_19925Not AvailablePositive4412865 - 441488675930.7
Trna-valNot AvailableNot AvailablePositive4414980 - 4415054Not Available
hypothetical proteinDZD52_19935Not AvailablePositive4415263 - 44155058815.41
type iv secretory system conjugative dna transfer family proteinDZD52_19940Not AvailablePositive4415542 - 441721562257.7
hypothetical proteinDZD52_19945Not AvailablePositive4417549 - 441795914500.3
conjugative transfer proteinDZD52_19950Not AvailablePositive4418071 - 441910536565.6
type iv secretion system protein virb9DZD52_19955Not AvailablePositive4419102 - 441986929493.1
trbi/virb10 family proteinDZD52_19960Not AvailablePositive4419866 - 442103541544.0
p-type dna transfer atpase virb11DZD52_19965Not AvailablePositive4421032 - 442209039328.9

Displaying genes 3751 – 3760 of 4089 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.