Xanthomonas nasturtii str. WHRI 8984

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas nasturtii strain WHRI 8984 is a Gram-negative bacterium characterized by its rod shape and motility, facilitated by the presence of flagella. This strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in its ecological niche. Xanthomonas nasturtii specifically interacts with its host, Nasturtium officinale, commonly known as watercress. This relationship underscores the bacterium's potential role in the plant's health and disease dynamics. Given its specialized host association, Xanthomonas nasturtii may have evolved mechanisms to thrive within the plant, possibly impacting the plant's physiology or resistance to other pathogens. The accession number QUZM00000000.1 serves as a reference for genomic data related to this strain, allowing for further research into its characteristics and behaviors. Understanding the specific interactions and mechanisms of Xanthomonas nasturtii with Nasturtium officinale could provide insights into plant-microbe relationships and the ecological roles of bacteria in agricultural systems. As such, Xanthomonas nasturtii str. WHRI 8984 exemplifies the intricate connections within ecosystems and highlights the importance of studying microbial interactions with specific plant hosts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas nasturtii
StrainWHRI 8984

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas nasturtii str. WHRI 8984
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Nasturtium officinale
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas nasturtii strain WHRI 8984 scf_5921_161, whole genome

Gene Summary

Adenine Count

842960 bp

Thymine Count

847260 bp

Guanine Count

1538774 bp

Cytosine Count

1542669 bp

Genome Length

4771852 bp

Protein-coding Genes

3985 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1439 domain-containing proteinDZD52_17790Not AvailableNegative3949315 - 394991120945.2
hypothetical proteinDZD52_17795Not AvailableNegative3949967 - 395032312639.1
duf3861 family proteinDZD52_17800Not AvailableNegative3950567 - 395090812925.3
m23 family peptidaseDZD52_17805Not AvailableNegative3950966 - 395155320708.0
dna-binding proteinDZD52_17810Not AvailableNegative3951714 - 395213914579.2
pyrroline-5-carboxylate reductaseDZD52_17815Not AvailableNegative3952686 - 395354028926.6
yggs family pyridoxal phosphate-dependent enzymeDZD52_17820Not AvailableNegative3953604 - 395429624736.6
type iv pilus twitching motility protein piltDZD52_17825Not AvailablePositive3954649 - 395568638668.6
pilt/pilu family type 4a pilus atpaseDZD52_17830Not AvailablePositive3955800 - 395693041933.7
is5/is1182 family transposaseDZD52_17835Not AvailableNegative3957175 - 39572894612.81

Displaying genes 3371 – 3380 of 4089 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.