Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_04375 | Not Available | Positive | 1072252 - 1072461 | 7697.91 |
| mbl fold metallo-hydrolase | A5893_04380 | Not Available | Positive | 1072557 - 1073465 | 33685.4 |
| gnat family acetyltransferase | A5893_04385 | Not Available | Positive | 1073619 - 1074044 | 16220.5 |
| atp-dependent chaperone clpb | A5893_04390 | Not Available | Negative | 1074191 - 1076788 | 97284.7 |
| laci family transcriptional regulator | A5893_04395 | Not Available | Positive | 1077041 - 1078057 | 38097.5 |
| hypothetical protein | A5893_04400 | Not Available | Positive | 1078441 - 1081635 | 115399.0 |
| hypothetical protein | A5893_04405 | Not Available | Positive | 1081622 - 1083004 | 50083.5 |
| hypothetical protein | A5893_04410 | Not Available | Positive | 1083018 - 1083527 | 18652.2 |
| hypothetical protein | A5893_04415 | Not Available | Positive | 1083502 - 1084440 | 33952.4 |
| glycoside hydrolase family 31 | A5893_04420 | Not Available | Positive | 1084659 - 1087097 | 92696.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
