Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_04325 | Not Available | Negative | 1060359 - 1060829 | 18446.0 |
| aconitate hydratase | A5893_04330 | Not Available | Positive | 1061247 - 1063514 | 81562.8 |
| hypothetical protein | A5893_04335 | Not Available | Negative | 1063586 - 1063987 | 14660.3 |
| clp protease clpc | A5893_04340 | Not Available | Negative | 1064327 - 1066867 | 94512.6 |
| hypothetical protein | A5893_04345 | Not Available | Positive | 1067046 - 1067237 | 7300.17 |
| zinc/iron permease | A5893_04350 | Not Available | Negative | 1067252 - 1067968 | 26155.5 |
| phospholipid phosphatase | A5893_04355 | Not Available | Negative | 1067965 - 1068540 | 22147.6 |
| methyltransferase | A5893_04360 | Not Available | Negative | 1068534 - 1069271 | 29351.2 |
| phosphoglucosamine mutase | A5893_04365 | Not Available | Positive | 1069383 - 1070765 | 49939.1 |
| cysteine desulfurase | A5893_04370 | Not Available | Positive | 1071019 - 1072152 | 41847.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
