Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_04275 | Not Available | Positive | 1050637 - 1051092 | 17030.7 |
| ii family cellulose-binding protein | A5893_04280 | Not Available | Positive | 1051094 - 1051525 | 16550.0 |
| peptidase m20 | A5893_04285 | Not Available | Negative | 1051527 - 1052444 | 34601.2 |
| tigr02757 family protein | A5893_04290 | Not Available | Positive | 1052534 - 1053325 | 31284.8 |
| l-glyceraldehyde 3-phosphate reductase | A5893_04295 | Not Available | Negative | 1053378 - 1054370 | 37742.9 |
| hypothetical protein | A5893_04300 | Not Available | Positive | 1054570 - 1054929 | 13516.1 |
| toxin hipa | A5893_04305 | Not Available | Positive | 1054923 - 1056227 | 49510.9 |
| hypothetical protein | A5893_04310 | Not Available | Negative | 1056220 - 1057668 | 54152.3 |
| energy-dependent translational throttle protein etta | A5893_04315 | Not Available | Negative | 1057747 - 1059426 | 62675.4 |
| iron-regulated protein | A5893_04320 | Not Available | Negative | 1059504 - 1060358 | 32400.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
