Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_04220 | Not Available | Negative | 1033140 - 1033904 | 29052.2 |
| hypothetical protein | A5893_04230 | Not Available | Positive | 1036897 - 1037538 | 24758.1 |
| methylmalonyl-coa mutase | A5893_04235 | Not Available | Negative | 1037582 - 1040953 | 126040.0 |
| hypothetical protein | A5893_04240 | Not Available | Positive | 1041146 - 1041778 | 24893.7 |
| hypothetical protein | A5893_04245 | Not Available | Positive | 1042065 - 1042988 | 34806.2 |
| hypothetical protein | A5893_04250 | Not Available | Positive | 1042988 - 1045645 | 100328.0 |
| hypothetical protein | A5893_04255 | Not Available | Negative | 1045642 - 1047075 | 54671.3 |
| transcriptional regulator | A5893_04260 | Not Available | Negative | 1047076 - 1047441 | 14136.2 |
| dna topoisomerase i | A5893_04265 | Not Available | Positive | 1047626 - 1050217 | 97219.1 |
| hypothetical protein | A5893_04270 | Not Available | Positive | 1050220 - 1050627 | 15385.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
