Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | A5893_04170 | Not Available | Positive | 1023872 - 1024570 | 26195.4 |
| hypothetical protein | A5893_04175 | Not Available | Negative | 1024799 - 1025764 | 36626.7 |
| endopeptidase la | A5893_04180 | Not Available | Negative | 1025815 - 1028292 | 92194.7 |
| hypothetical protein | A5893_04185 | Not Available | Positive | 1028545 - 1029165 | 23267.8 |
| hypothetical protein | A5893_04190 | Not Available | Positive | 1029258 - 1029635 | 14249.5 |
| hypothetical protein | A5893_04195 | Not Available | Negative | 1029687 - 1030274 | 23225.3 |
| glyoxalase | A5893_04200 | Not Available | Negative | 1030578 - 1030952 | 13180.6 |
| organic hydroperoxide resistance protein | A5893_04205 | Not Available | Negative | 1030993 - 1031403 | 14453.0 |
| transcriptional regulator | A5893_04210 | Not Available | Positive | 1031658 - 1031990 | 12476.5 |
| hypothetical protein | A5893_04215 | Not Available | Negative | 1032044 - 1032958 | 36474.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
