Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | A5893_04120 | Not Available | Positive | 1006777 - 1007406 | 24184.7 |
| hypothetical protein | A5893_04125 | Not Available | Positive | 1007668 - 1008102 | 16937.4 |
| haloacid dehalogenase | A5893_04130 | Not Available | Positive | 1008105 - 1010663 | 94180.1 |
| histidine kinase | A5893_04135 | Not Available | Positive | 1010758 - 1012560 | 67204.1 |
| chemotaxis protein cher | A5893_04140 | Not Available | Positive | 1012642 - 1015884 | 121430.0 |
| hypothetical protein | A5893_04145 | Not Available | Negative | 1016005 - 1016358 | 13644.5 |
| peptidase s41 | A5893_04150 | Not Available | Negative | 1016428 - 1019679 | 121604.0 |
| methylmalonyl-coa carboxyltransferase | A5893_04155 | Not Available | Negative | 1020157 - 1021710 | 57075.2 |
| hypothetical protein | A5893_04160 | Not Available | Positive | 1021936 - 1022217 | 10676.1 |
| hypothetical protein | A5893_04165 | Not Available | Positive | 1022262 - 1023854 | 56587.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
