Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate 5-kinase | A5893_04070 | Not Available | Positive | 997849 - 998883 | 37202.3 |
| gamma-glutamyl-phosphate reductase | A5893_04075 | Not Available | Positive | 998885 - 1000132 | 45807.4 |
| hypothetical protein | A5893_04080 | Not Available | Positive | 1000370 - 1001986 | 62391.1 |
| atp-binding protein | A5893_04085 | Not Available | Negative | 1002033 - 1002722 | 25821.4 |
| abc transporter | A5893_04090 | Not Available | Negative | 1002726 - 1003985 | 45959.5 |
| rnd transporter | A5893_04095 | Not Available | Negative | 1003982 - 1005085 | 41179.8 |
| osmotically inducible protein osmc | A5893_04100 | Not Available | Negative | 1005151 - 1005618 | 17446.3 |
| hypothetical protein | A5893_04105 | Not Available | Negative | 1005642 - 1005851 | 7685.89 |
| hypothetical protein | A5893_04110 | Not Available | Negative | 1006120 - 1006335 | 8003.36 |
| sulfurtransferase | A5893_04115 | Not Available | Positive | 1006393 - 1006704 | 11208.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
