Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s oxidoreductase | A5893_03920 | Not Available | Positive | 965135 - 965863 | 26608.1 |
| hypothetical protein | A5893_03925 | Not Available | Positive | 965987 - 966289 | 11715.6 |
| threonine--trna ligase | A5893_03930 | Not Available | Positive | 966433 - 968361 | 73260.2 |
| translation initiation factor if-3 | A5893_03935 | Not Available | Positive | 968388 - 968930 | 20600.1 |
| 50s ribosomal protein l35 | A5893_03940 | Not Available | Positive | 968961 - 969161 | 7348.17 |
| 50s ribosomal protein l20 | A5893_03945 | Not Available | Positive | 969234 - 969578 | 13033.1 |
| hypothetical protein | A5893_03950 | Not Available | Positive | 969816 - 975161 | 186579.0 |
| hypothetical protein | A5893_03955 | Not Available | Positive | 975161 - 976105 | 34768.7 |
| hypothetical protein | A5893_03960 | Not Available | Positive | 976178 - 977458 | 49630.0 |
| pspc family transcriptional regulator | A5893_03965 | Not Available | Positive | 977462 - 977683 | 8969.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
